Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG2B | ENSSDUP00000024010 | ENSSDUP00000003984 | ENSSDUP00000024010 | Autophagy related 2B. | Uncharacterized protein. | 0.650 |
ATG2B | LOC111231860 | ENSSDUP00000003984 | ENSSDUP00000031602 | Autophagy related 2B. | Unc-51 like autophagy activating kinase 1a. | 0.981 |
ATG2B | LOC111233801 | ENSSDUP00000003984 | ENSSDUP00000003011 | Autophagy related 2B. | Serine/threonine kinase 35; Belongs to the protein kinase superfamily. | 0.633 |
ATG2B | LOC111236271 | ENSSDUP00000003984 | ENSSDUP00000024041 | Autophagy related 2B. | WD repeat domain, phosphoinositide interacting 1. | 0.702 |
ATG2B | WIPI1 | ENSSDUP00000003984 | ENSSDUP00000005665 | Autophagy related 2B. | WD repeat domain, phosphoinositide interacting 1. | 0.968 |
ATG2B | atg2a | ENSSDUP00000003984 | ENSSDUP00000024303 | Autophagy related 2B. | Autophagy related 2A. | 0.910 |
ATG2B | atg9a | ENSSDUP00000003984 | ENSSDUP00000019463 | Autophagy related 2B. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.650 |
ATG2B | ulk1 | ENSSDUP00000003984 | ENSSDUP00000030142 | Autophagy related 2B. | Unc-51 like autophagy activating kinase 1. | 0.981 |
ATG2B | ulk2 | ENSSDUP00000003984 | ENSSDUP00000030795 | Autophagy related 2B. | Unc-51 like autophagy activating kinase 2. | 0.981 |
ATG2B | wipi2 | ENSSDUP00000003984 | ENSSDUP00000025429 | Autophagy related 2B. | WD repeat domain, phosphoinositide interacting 2. | 0.968 |
ENSSDUP00000024010 | ATG2B | ENSSDUP00000024010 | ENSSDUP00000003984 | Uncharacterized protein. | Autophagy related 2B. | 0.650 |
ENSSDUP00000024010 | LOC111231860 | ENSSDUP00000024010 | ENSSDUP00000031602 | Uncharacterized protein. | Unc-51 like autophagy activating kinase 1a. | 0.833 |
ENSSDUP00000024010 | LOC111233801 | ENSSDUP00000024010 | ENSSDUP00000003011 | Uncharacterized protein. | Serine/threonine kinase 35; Belongs to the protein kinase superfamily. | 0.649 |
ENSSDUP00000024010 | LOC111236271 | ENSSDUP00000024010 | ENSSDUP00000024041 | Uncharacterized protein. | WD repeat domain, phosphoinositide interacting 1. | 0.668 |
ENSSDUP00000024010 | WIPI1 | ENSSDUP00000024010 | ENSSDUP00000005665 | Uncharacterized protein. | WD repeat domain, phosphoinositide interacting 1. | 0.668 |
ENSSDUP00000024010 | atg2a | ENSSDUP00000024010 | ENSSDUP00000024303 | Uncharacterized protein. | Autophagy related 2A. | 0.650 |
ENSSDUP00000024010 | atg9a | ENSSDUP00000024010 | ENSSDUP00000019463 | Uncharacterized protein. | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.900 |
ENSSDUP00000024010 | ulk1 | ENSSDUP00000024010 | ENSSDUP00000030142 | Uncharacterized protein. | Unc-51 like autophagy activating kinase 1. | 0.833 |
ENSSDUP00000024010 | ulk2 | ENSSDUP00000024010 | ENSSDUP00000030795 | Uncharacterized protein. | Unc-51 like autophagy activating kinase 2. | 0.833 |
ENSSDUP00000024010 | wipi2 | ENSSDUP00000024010 | ENSSDUP00000025429 | Uncharacterized protein. | WD repeat domain, phosphoinositide interacting 2. | 0.668 |
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