close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111225631RAB11 family interacting protein 5a (class I). (1291 aa)    
Predicted Functional Partners:
rab11a
RAB11a, member RAS oncogene family.
   
 0.970
LOC111231922
Uncharacterized protein.
   
 0.970
LOC111231923
RAB11B, member RAS oncogene family, a.
   
 0.970
LOC111222643
RAB11a, member RAS oncogene family, like.
   
 0.970
LOC111229181
Uncharacterized protein.
   
 0.970
LOC111232380
EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.912
rab11fip2
RAB11 family interacting protein 2 (class I).
     
 
0.900
LOC111229642
Uncharacterized protein.
     
 
0.900
rab25
RAB25, member RAS oncogene family b.
   
 0.612
LOC111223021
RAB25, member RAS oncogene family a.
   
 0.612
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (32%) [HD]