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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc9ER membrane protein complex subunit 9. (205 aa)    
Predicted Functional Partners:
emc2
ER membrane protein complex subunit 2.
   
 0.946
emc1
ER membrane protein complex subunit 1.
    
 0.917
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.881
mmgt1
Membrane magnesium transporter 1.
    
 0.861
Emc6
ER membrane protein complex subunit 6.
   
 0.849
LOC111222071
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 
 0.837
emc7
ER membrane protein complex subunit 7.
    
 
 0.823
LOC111237641
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 
 0.801
emc10
ER membrane protein complex subunit 10.
    
 
 0.759
gins2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.435
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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