STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221481Engulfment and cell motility 2. (723 aa)    
Predicted Functional Partners:
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 0.987
ENSSDUP00000010028
Ras homolog gene family, member Gd.
    
 0.969
LOC111239519
Ras homolog family member Gb.
    
 0.969
LOC111223159
Engulfment and cell motility 1.
  
  
 
0.901
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
  
 
 0.793
ENSSDUP00000018790
DHR-2 domain-containing protein; Belongs to the DOCK family.
    
 0.746
ENSSDUP00000018802
DHR-2 domain-containing protein; Belongs to the DOCK family.
    
 0.746
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
    
 0.746
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
    
 0.746
dock3
Uncharacterized protein; Belongs to the DOCK family.
    
 0.737
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.