STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll10Tubulin tyrosine ligase-like family, member 10. (600 aa)    
Predicted Functional Partners:
drc7
Uncharacterized protein.
   
  
 0.631
ttc25
Tetratricopeptide repeat domain 25.
    
 
 0.611
dcp2
Decapping mRNA 2.
    
 
 0.602
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.601
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
      
 0.598
armc9
Armadillo repeat containing 9.
      
 0.589
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
      
 0.584
pibf1
Progesterone immunomodulatory binding factor 1.
    
 
 0.576
ENSSDUP00000018857
Uncharacterized protein.
      
 0.575
ENSSDUP00000006665
Decapping mRNA 1B.
    
 
 0.559
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.