Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000016751 | gskip | ENSSDUP00000016751 | ENSSDUP00000004142 | Uncharacterized protein. | Gsk3b interacting protein. | 0.481 |
LOC111220843 | gskip | ENSSDUP00000013472 | ENSSDUP00000004142 | Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. | Gsk3b interacting protein. | 0.665 |
LOC111230141 | gskip | ENSSDUP00000020056 | ENSSDUP00000004142 | Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. | Gsk3b interacting protein. | 0.665 |
gsk3b | gskip | ENSSDUP00000006189 | ENSSDUP00000004142 | Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. | Gsk3b interacting protein. | 0.665 |
gskip | ENSSDUP00000016751 | ENSSDUP00000004142 | ENSSDUP00000016751 | Gsk3b interacting protein. | Uncharacterized protein. | 0.481 |
gskip | LOC111220843 | ENSSDUP00000004142 | ENSSDUP00000013472 | Gsk3b interacting protein. | Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. | 0.665 |
gskip | LOC111230141 | ENSSDUP00000004142 | ENSSDUP00000020056 | Gsk3b interacting protein. | Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. | 0.665 |
gskip | gsk3b | ENSSDUP00000004142 | ENSSDUP00000006189 | Gsk3b interacting protein. | Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. | 0.665 |
gskip | pin1 | ENSSDUP00000004142 | ENSSDUP00000021085 | Gsk3b interacting protein. | Peptidyl-prolyl cis-trans isomerase. | 0.483 |
pin1 | gskip | ENSSDUP00000021085 | ENSSDUP00000004142 | Peptidyl-prolyl cis-trans isomerase. | Gsk3b interacting protein. | 0.483 |