STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpgat1Lysophosphatidylglycerol acyltransferase 1. (377 aa)    
Predicted Functional Partners:
lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.930
crls1
Cardiolipin synthase 1.
  
 0.928
LOC111233198
Lysophosphatidylcholine acyltransferase 1.
     
 0.922
lpcat4
Lysophosphatidylcholine acyltransferase 4.
     
 0.922
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.922
lclat1
Lysocardiolipin acyltransferase 1.
   
 
0.915
gpam
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.715
LOC111220809
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.607
mttp
Microsomal triglyceride transfer protein.
      
 0.601
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.592
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.