STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111226423Toll-like receptor 1. (802 aa)    
Predicted Functional Partners:
LOC111240019
TIR domain-containing protein.
  
  
0.970
TLR2
Toll like receptor 2.
     
0.968
LOC111222405
Toll-like receptor 18.
     
0.914
LOC111236680
TIR domain-containing protein.
  
  
0.715
Tirap
Toll-interleukin 1 receptor (TIR) domain containing adaptor protein.
  
 0.637
ENSSDUP00000023642
MYD88 innate immune signal transduction adaptor.
   
 0.592
LOC111220968
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.592
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 0.574
ENSSDUP00000004861
Latrophilin domain-containing protein.
   
   0.549
LOC111231518
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
   
   0.549
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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