STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231372Acyl-CoA synthetase long chain family member 1a. (697 aa)    
Predicted Functional Partners:
fasn
Coiled-coil domain containing 57.
   
 0.920
mgll
Monoglyceride lipase.
    
 0.819
acsl3
AMP-binding domain-containing protein.
  
0.760
acsl4
Acyl-CoA synthetase long chain family member 4a.
  
0.760
LOC111229033
Acyl-CoA synthetase long chain family member 3b.
  
0.760
LOC111228616
Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.707
LOC111223785
Carnitine palmitoyltransferase 1Cb; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.689
LOC111228696
Carnitine palmitoyltransferase 1Ab (liver); Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.689
LOC111219542
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.689
LOC111233015
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
   
  0.684
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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