ltn1 protein (Seriola dumerili) - STRING interaction network

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ltn1

RING-type domain-containing protein. (1767 aa)

Predicted Functional Partners:

trip12

0.974

NEMF

0.958

ENSSDUP00000025803

0.913

rpl23a

0.838

tcf25

0.826

rpl11

0.822

rpl6

0.788

rpl9

0.770

rpl31

0.760

rpl8

0.757

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000025803	ltn1	ENSSDUP00000025803	ENSSDUP00000004299	Uncharacterized protein.	RING-type domain-containing protein.	0.913
ENSSDUP00000025803	rpl11	ENSSDUP00000025803	ENSSDUP00000011312	Uncharacterized protein.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.820
ENSSDUP00000025803	rpl23a	ENSSDUP00000025803	ENSSDUP00000005473	Uncharacterized protein.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.857
ENSSDUP00000025803	rpl31	ENSSDUP00000025803	ENSSDUP00000030284	Uncharacterized protein.	Ribosomal protein L31.	0.518
ENSSDUP00000025803	rpl6	ENSSDUP00000025803	ENSSDUP00000031988	Uncharacterized protein.	Ribosomal protein L6.	0.547
ENSSDUP00000025803	rpl8	ENSSDUP00000025803	ENSSDUP00000014372	Uncharacterized protein.	Ribosomal protein L8.	0.762
ENSSDUP00000025803	rpl9	ENSSDUP00000025803	ENSSDUP00000031275	Uncharacterized protein.	Ribosomal protein L9.	0.740
ENSSDUP00000025803	tcf25	ENSSDUP00000025803	ENSSDUP00000027467	Uncharacterized protein.	Transcription factor 25 (basic helix-loop-helix).	0.657
NEMF	ltn1	ENSSDUP00000021812	ENSSDUP00000004299	Nuclear export mediator factor.	RING-type domain-containing protein.	0.958
NEMF	rpl11	ENSSDUP00000021812	ENSSDUP00000011312	Nuclear export mediator factor.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.829
NEMF	rpl23a	ENSSDUP00000021812	ENSSDUP00000005473	Nuclear export mediator factor.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.807
NEMF	rpl31	ENSSDUP00000021812	ENSSDUP00000030284	Nuclear export mediator factor.	Ribosomal protein L31.	0.748
NEMF	rpl6	ENSSDUP00000021812	ENSSDUP00000031988	Nuclear export mediator factor.	Ribosomal protein L6.	0.547
NEMF	rpl8	ENSSDUP00000021812	ENSSDUP00000014372	Nuclear export mediator factor.	Ribosomal protein L8.	0.836
NEMF	rpl9	ENSSDUP00000021812	ENSSDUP00000031275	Nuclear export mediator factor.	Ribosomal protein L9.	0.740
NEMF	tcf25	ENSSDUP00000021812	ENSSDUP00000027467	Nuclear export mediator factor.	Transcription factor 25 (basic helix-loop-helix).	0.812
ltn1	ENSSDUP00000025803	ENSSDUP00000004299	ENSSDUP00000025803	RING-type domain-containing protein.	Uncharacterized protein.	0.913
ltn1	NEMF	ENSSDUP00000004299	ENSSDUP00000021812	RING-type domain-containing protein.	Nuclear export mediator factor.	0.958
ltn1	rpl11	ENSSDUP00000004299	ENSSDUP00000011312	RING-type domain-containing protein.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.822
ltn1	rpl23a	ENSSDUP00000004299	ENSSDUP00000005473	RING-type domain-containing protein.	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.	0.838