STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111222494Choline kinase alpha. (418 aa)    
Predicted Functional Partners:
LOC111229283
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.979
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
   
 
 0.979
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
     
 0.963
LOC111234454
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.963
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
     
 0.963
LOC111232752
Phosphoethanolamine methyltransferase.
    
 0.930
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
    
 0.929
LOC111220061
Uncharacterized protein.
     
 0.911
Phospho1
Phosphatase, orphan 1.
     
 0.911
etnppl
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.904
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.