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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inpp1Si:ch211-160o17.2. (381 aa)    
Predicted Functional Partners:
LOC111237321
Inositol-1-monophosphatase.
    
 0.943
LOC111224347
Inositol-1-monophosphatase.
    
 0.943
ENSSDUP00000009973
Uncharacterized protein.
    
 0.941
LOC111224319
Inositol-1-monophosphatase.
    
 0.941
LOC111234530
Inositol polyphosphate-5-phosphatase Kb.
    
 0.920
LOC111234200
Inositol polyphosphate-5-phosphatase Ja.
    
 0.920
ENSSDUP00000027716
Uncharacterized protein.
    
 0.920
LOC111238217
Inositol polyphosphate-5-phosphatase Ka.
    
 0.920
INPP5A
Inositol polyphosphate-5-phosphatase A.
     
  0.915
impad1
Inositol monophosphatase domain containing 1.
     
0.908
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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