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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc14DnaJ (Hsp40) homolog, subfamily C, member 14. (668 aa)    
Predicted Functional Partners:
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.521
Mrps6
Mitochondrial ribosomal protein S6.
      
 0.472
sarnp
SAP domain containing ribonucleoprotein.
 
  
 
 0.469
ENSSDUP00000018554
Poly [ADP-ribose] polymerase.
      
 0.463
kntc1
Kinetochore associated 1.
      
 0.459
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.457
ppih
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.457
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
      
 0.434
ybey
YbeY metalloendoribonuclease.
      
 0.428
dnajc4
DnaJ (Hsp40) homolog, subfamily C, member 4.
      
 0.428
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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