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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000004462Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
ENSSDUP00000005582
Fibronectin type-III domain-containing protein.
 
     0.916
ENSSDUP00000005660
Uncharacterized protein.
 
     0.912
ENSSDUP00000004189
Uncharacterized protein.
 
    
0.904
ENSSDUP00000005999
Uncharacterized protein.
 
    
0.904
ENSSDUP00000004388
Uncharacterized protein.
 
     
0.899
ENSSDUP00000006101
Uncharacterized protein.
 
     
0.899
ENSSDUP00000003495
Uncharacterized protein.
 
      0.898
ENSSDUP00000005260
Uncharacterized protein.
 
      0.898
ENSSDUP00000005433
Uncharacterized protein.
 
      0.898
ENSSDUP00000005505
Uncharacterized protein.
 
      0.898
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.