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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231653Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family. (266 aa)    
Predicted Functional Partners:
LOC111233897
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
   
 0.972
LOC111237347
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
   
 0.972
LOC111240402
Cytochrome P450, family 46, subfamily A, polypeptide 1, tandem duplicate 4.
   
 0.934
dhcr7
7-dehydrocholesterol reductase.
   
 0.921
LOC111222696
Si:ch211-113j14.1; Belongs to the cytochrome P450 family.
   
 0.918
LOC111218457
Cytochrome P450, family 27, subfamily A, polypeptide 7; Belongs to the cytochrome P450 family.
   
 0.918
LOC111218691
Si:dkey-91i10.3; Belongs to the cytochrome P450 family.
   
 0.918
dhcr24
24-dehydrocholesterol reductase.
   
 
 0.888
sqle
Squalene epoxidase a.
   
 
 0.874
soat1
O-acyltransferase.
   
 0.828
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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