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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epha2Eph receptor A2 b. (998 aa)    
Predicted Functional Partners:
LOC111221222
Ephrin-A5a; Belongs to the ephrin family.
   
 0.938
efna1
Ephrin-A1b; Belongs to the ephrin family.
   
 0.932
LOC111223198
Ephrin-A1a; Belongs to the ephrin family.
   
 0.932
LOC111230153
Si:dkey-246i14.3; Belongs to the ephrin family.
   
 0.897
LOC111226056
Ephrin-A2a; Belongs to the ephrin family.
   
 0.886
ENSSDUP00000021827
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.886
efna3
Ephrin-A3b; Belongs to the ephrin family.
   
 0.871
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
 0.830
grb2
Growth factor receptor-bound protein 2b.
   
 0.802
Bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
    
 0.726
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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