STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111216326Ectonucleotide pyrophosphatase/phosphodiesterase 1. (799 aa)    
Predicted Functional Partners:
LOC111231071
NAD kinase b.
   
 
  0.929
nadk
NAD kinase a.
   
 
  0.929
LOC111219713
Nucleoside diphosphate kinase.
     
 0.927
nme3
Nucleoside diphosphate kinase.
     
 0.927
LOC111226863
NDK domain-containing protein; Belongs to the NDK family.
     
 0.927
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
     
 0.923
nme6
Nucleoside diphosphate kinase.
     
 0.923
LOC111230191
Nucleoside diphosphate kinase.
     
 0.923
LOC111240130
5'-nucleotidase ecto.
  
 
 0.919
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
  
 
 0.919
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.