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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35f6Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter. (378 aa)    
Predicted Functional Partners:
faf2
Fas associated factor family member 2.
   
  
 0.609
Slc35b2
Solute carrier family 35 member B2.
      
 0.605
rars2
Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.593
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.591
slc35b4
Solute carrier family 35 member B4.
      
 0.587
slc35c1
Solute carrier family 35 member C1.
   
  
 0.575
otud4
OTU domain-containing protein.
   
  
 0.551
nudt6
Nudix (nucleoside diphosphate linked moiety X)-type motif 6.
      
 0.495
LOC111219987
Si:ch211-141o9.10.
  
  
 0.475
SLC35E2A
Solute carrier family 35 member E2A.
      
 0.467
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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