Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111223618Inhibitor of growth protein. (289 aa)    
Predicted Functional Partners:
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.845
meaf6
MYST/Esa1-associated factor 6.
   
 0.842
yeats4
YEATS domain containing 4.
   
 0.832
dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.830
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.791
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.743
mrgbp
MRG/MORF4L binding protein.
    
 0.743
ENSSDUP00000000441
AT rich interactive domain 4A (RBP1-like).
   
 0.729
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.729
LOC111228576
Mortality factor 4 like 1.
   
 0.723
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: medium (54%) [HD]