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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35E2ASolute carrier family 35 member E2A. (388 aa)    
Predicted Functional Partners:
slc35c1
Solute carrier family 35 member C1.
      
 0.535
Slc35b2
Solute carrier family 35 member B2.
    
 
 0.504
slc35b4
Solute carrier family 35 member B4.
      
 0.487
slc35f6
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
      
 0.467
tgds
NAD(P)-bd_dom domain-containing protein.
   
 
 0.452
slc35g1
Solute carrier family 35 member G1.
      
 0.430
nr2c2ap
Nuclear receptor 2C2-associated protein.
      
 0.420
cherp
Calcium homeostasis endoplasmic reticulum protein.
      
 0.418
SUGP1
SURP and G-patch domain containing 1.
      
 0.416
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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