Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC111237257Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (183 aa)    
Predicted Functional Partners:
lcn2
Lipocalin 15; Belongs to the calycin superfamily. Lipocalin family.
  
 
0.919
ptges
Prostaglandin E synthase.
   
 
 0.919
LOC111234505
Zgc:153704; Belongs to the calycin superfamily. Lipocalin family.
  
  
 
0.911
ptgs2
Prostaglandin-endoperoxide synthase 2b.
     
 0.909
LOC111222893
Prostaglandin I2 (prostacyclin) synthase; Belongs to the cytochrome P450 family.
     
 0.906
LOC111236442
Prostaglandin-endoperoxide synthase 1.
     
 0.905
PTGS1
Prostaglandin-endoperoxide synthase 1.
     
 0.905
tbxas1
Thromboxane A synthase 1 (platelet); Belongs to the cytochrome P450 family.
     
  0.900
LOC111218973
Prostaglandin E synthase 3a (cytosolic).
     
  0.900
ptgis
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
  0.900
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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