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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218283Ig-like domain-containing protein. (663 aa)    
Predicted Functional Partners:
LOC111236683
Ig-like domain-containing protein.
   
 0.964
ENSSDUP00000031975
Ig-like domain-containing protein.
   
 0.964
LOC111233431
SAM domain, SH3 domain and nuclear localisation signals 1a.
   
  
 0.608
spg21
SPG21 abhydrolase domain containing, maspardin.
      
 0.602
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.585
ENSSDUP00000023101
FA complementation group M.
    
 0.578
fancm
Uncharacterized protein.
    
 0.563
ENSSDUP00000008987
TROVE domain-containing protein.
  
 
 0.560
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.558
pold1
DNA polymerase.
   
 0.548
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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