close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srfSerum response factor b. (639 aa)    
Predicted Functional Partners:
ENSSDUP00000013487
ETS transcription factor ELK4.
    
 0.986
elk1
ETS transcription factor ELK1.
    
 0.969
LOC111237574
MADS-box domain-containing protein.
  
  
 
0.903
MYOCD
Myocardin.
    
 0.860
LOC111219901
Myocardin related transcription factor Ab.
    
 0.780
LOC111235510
Myocardin related transcription factor Aa.
    
 0.732
mrtfb
Myocardin related transcription factor Ba.
    
 0.720
LOC111217663
Myocardin related transcription factor Bb.
    
 0.720
LOC111232025
Im:7152348.
    
 0.659
map3k2
Mitogen-activated protein kinase kinase kinase 2.
    
 0.622
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.