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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabifRAB interacting factor. (130 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
      
 0.695
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.695
itsn2
Intersectin 2a.
      
 0.695
itsn1
Intersectin 1 (SH3 domain protein).
      
 0.695
eif2b2
Eukaryotic translation initiation factor 2B, subunit 2 beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
  
 0.665
grb2
Growth factor receptor-bound protein 2b.
      
 0.664
eif5
Eukaryotic translation initiation factor 5.
      
 0.657
eif2b5
Eukaryotic translation initiation factor 2B, subunit 5 epsilon.
      
 0.656
eif2b1
Eukaryotic translation initiation factor 2B, subunit 1 alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
  
 0.656
LOC111219788
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
      
 0.653
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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