STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
heatr6HEAT repeat containing 6. (1135 aa)    
Predicted Functional Partners:
relch
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
      
 0.607
ints4
Integrator complex subunit 4.
      
 0.604
LOC111236694
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.587
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
      
 0.585
rgn
Regucalcin.
      
 0.537
ints2
Integrator complex subunit 2.
   
  
 0.476
LOC111218426
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.429
tekt3
Tektin 3.
      
 0.426
plekha8
Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8.
      
 0.424
usp32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
      
 0.422
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.