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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111238858Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (475 aa)    
Predicted Functional Partners:
lef1
Lymphoid enhancer-binding factor 1.
    
 0.982
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
0.972
ENSSDUP00000029748
Protein kinase domain-containing protein.
    
 0.972
LOC111224272
HMG box domain-containing protein.
    
 0.971
LOC111226906
HMG box domain-containing protein.
    
 0.971
tcf7
Transcription factor 7.
    
 0.971
tcf7l2
Transcription factor 7 like 2.
    
 0.971
LOC111226193
Fork-head domain-containing protein.
    
 0.910
LOC111224434
Forkhead box O1 a.
    
 0.910
LOC111232497
Forkhead box O4.
    
 0.910
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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