STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl15Kelch-like family member 15. (631 aa)    
Predicted Functional Partners:
LOC111224075
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.584
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.584
ENSSDUP00000029239
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
 
    
 0.579
LOC111238986
Zinc finger and BTB domain containing 2b.
    
 0.552
Bbs9
Bardet-Biedl syndrome 9.
    
 0.529
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.494
bbs7
Bardet-Biedl syndrome 7.
    
 0.493
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.489
rlim
Ring finger protein, LIM domain interacting.
   
 
 0.484
Rbbp8
SAE2 domain-containing protein.
    
 
 0.481
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.