STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pignPhosphatidylinositol glycan anchor biosynthesis, class N. (933 aa)    
Predicted Functional Partners:
pigv
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.965
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.789
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 
 0.702
pigb
Mannosyltransferase.
      
 0.664
piga
Phosphatidylinositol glycan anchor biosynthesis, class A.
      
 0.663
pigh
Phosphatidylinositol glycan anchor biosynthesis, class H.
    
 
 0.661
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
      
 0.660
pigc
Phosphatidylinositol glycan anchor biosynthesis, class C.
      
 0.644
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
      
0.643
lemd3
LEM domain containing 3.
      
 0.630
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.