STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000005542annotation not available (74 aa)    
Predicted Functional Partners:
nudc
NudC nuclear distribution protein.
     
 0.584
bub3
BUB3 mitotic checkpoint protein.
    
 0.521
cdc20
Cell division cycle 20 homolog.
     
 0.509
nudcd2
NudC domain containing 2.
     
 0.439
nudcd3
NudC domain containing 3.
     
 0.439
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
     
 0.425
LOC111231747
Uncharacterized protein.
     
 0.425
espl1
Extra spindle pole bodies like 1, separase.
     
 0.423
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.421
plk2
Serine/threonine-protein kinase PLK.
    
 0.415
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.