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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218048Transmembrane p24 trafficking protein 3. (207 aa)    
Predicted Functional Partners:
tmed2
Transmembrane p24 trafficking protein 2.
   
0.909
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.833
ENSSDUP00000004737
Uncharacterized protein.
   
 0.828
tmed10
Transmembrane p24 trafficking protein 10.
   
0.828
mrps35
Mitochondrial ribosomal protein S35.
   
 
 0.779
dap3
Death associated protein 3.
   
 
 0.767
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
   0.766
LOC111232465
Transmembrane p24 trafficking protein 9.
   
0.761
LOC111232738
GOLD domain-containing protein.
   
 0.761
LOC111236984
Transmembrane p24 trafficking protein 4.
   
0.761
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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