rtn3 protein (Seriola dumerili) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

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Coexpression

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[Homology]

Score

rtn3

Reticulon. (220 aa)

Predicted Functional Partners:

ENSSDUP00000000516

0.748

pygm

0.677

pygb

0.674

LOC111234501

0.671

pygl

0.655

sec63

0.605

LOC111231827

0.561

vta1

0.535

LOC111217770

0.493

snx15

0.473

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSDUP00000000516	LOC111217770	ENSSDUP00000000516	ENSSDUP00000030963	Uncharacterized protein.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.493
ENSSDUP00000000516	LOC111231827	ENSSDUP00000000516	ENSSDUP00000029070	Uncharacterized protein.	Receptor expression-enhancing protein.	0.561
ENSSDUP00000000516	rtn3	ENSSDUP00000000516	ENSSDUP00000005596	Uncharacterized protein.	Reticulon.	0.748
ENSSDUP00000000516	sec63	ENSSDUP00000000516	ENSSDUP00000017361	Uncharacterized protein.	SEC63 homolog, protein translocation regulator.	0.605
ENSSDUP00000000516	snx15	ENSSDUP00000000516	ENSSDUP00000029351	Uncharacterized protein.	Sorting nexin 15.	0.473
ENSSDUP00000000516	vta1	ENSSDUP00000000516	ENSSDUP00000002758	Uncharacterized protein.	Vesicle (multivesicular body) trafficking 1.	0.535
LOC111217770	ENSSDUP00000000516	ENSSDUP00000030963	ENSSDUP00000000516	Nerve growth factor receptor a (TNFR superfamily, member 16).	Uncharacterized protein.	0.493
LOC111217770	rtn3	ENSSDUP00000030963	ENSSDUP00000005596	Nerve growth factor receptor a (TNFR superfamily, member 16).	Reticulon.	0.493
LOC111231827	ENSSDUP00000000516	ENSSDUP00000029070	ENSSDUP00000000516	Receptor expression-enhancing protein.	Uncharacterized protein.	0.561
LOC111231827	rtn3	ENSSDUP00000029070	ENSSDUP00000005596	Receptor expression-enhancing protein.	Reticulon.	0.561
LOC111231827	snx15	ENSSDUP00000029070	ENSSDUP00000029351	Receptor expression-enhancing protein.	Sorting nexin 15.	0.825
LOC111234501	pygb	ENSSDUP00000006903	ENSSDUP00000005422	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.901
LOC111234501	pygl	ENSSDUP00000006903	ENSSDUP00000009653	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.901
LOC111234501	pygm	ENSSDUP00000006903	ENSSDUP00000005231	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.900
LOC111234501	rtn3	ENSSDUP00000006903	ENSSDUP00000005596	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Reticulon.	0.671
pygb	LOC111234501	ENSSDUP00000005422	ENSSDUP00000006903	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.901
pygb	pygl	ENSSDUP00000005422	ENSSDUP00000009653	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.900
pygb	pygm	ENSSDUP00000005422	ENSSDUP00000005231	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.900
pygb	rtn3	ENSSDUP00000005422	ENSSDUP00000005596	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Reticulon.	0.674
pygl	LOC111234501	ENSSDUP00000009653	ENSSDUP00000006903	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.901