syt9 protein (Seriola dumerili) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

syt9

Synaptotagmin IXb. (527 aa)

Predicted Functional Partners:

LOC111217580

0.540

itsn2

0.540

syt1

0.540

LOC111219749

0.540

LOC111219363

0.531

LOC111238192

0.531

LOC111221499

0.492

LOC111233692

0.492

syt4

0.492

vamp3

0.488

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111217580	LOC111219363	ENSSDUP00000001735	ENSSDUP00000001074	Intersectin 2b.	Uncharacterized protein.	0.538
LOC111217580	LOC111219749	ENSSDUP00000001735	ENSSDUP00000032473	Intersectin 2b.	Synaptotagmin Vb.	0.538
LOC111217580	LOC111221499	ENSSDUP00000001735	ENSSDUP00000010556	Intersectin 2b.	C2 domain-containing protein.	0.538
LOC111217580	LOC111233692	ENSSDUP00000001735	ENSSDUP00000027915	Intersectin 2b.	Synaptotagmin XIb.	0.538
LOC111217580	LOC111238192	ENSSDUP00000001735	ENSSDUP00000027950	Intersectin 2b.	Synaptotagmin IIa.	0.538
LOC111217580	itsn2	ENSSDUP00000001735	ENSSDUP00000016866	Intersectin 2b.	Intersectin 2a.	0.942
LOC111217580	syt1	ENSSDUP00000001735	ENSSDUP00000024977	Intersectin 2b.	Synaptotagmin Ia.	0.538
LOC111217580	syt4	ENSSDUP00000001735	ENSSDUP00000030061	Intersectin 2b.	Synaptotagmin IV.	0.538
LOC111217580	syt9	ENSSDUP00000001735	ENSSDUP00000005662	Intersectin 2b.	Synaptotagmin IXb.	0.540
LOC111217580	vamp3	ENSSDUP00000001735	ENSSDUP00000001421	Intersectin 2b.	V-SNARE coiled-coil homology domain-containing protein.	0.711
LOC111219363	LOC111217580	ENSSDUP00000001074	ENSSDUP00000001735	Uncharacterized protein.	Intersectin 2b.	0.538
LOC111219363	LOC111221499	ENSSDUP00000001074	ENSSDUP00000010556	Uncharacterized protein.	C2 domain-containing protein.	0.705
LOC111219363	LOC111233692	ENSSDUP00000001074	ENSSDUP00000027915	Uncharacterized protein.	Synaptotagmin XIb.	0.705
LOC111219363	itsn2	ENSSDUP00000001074	ENSSDUP00000016866	Uncharacterized protein.	Intersectin 2a.	0.538
LOC111219363	syt4	ENSSDUP00000001074	ENSSDUP00000030061	Uncharacterized protein.	Synaptotagmin IV.	0.705
LOC111219363	syt9	ENSSDUP00000001074	ENSSDUP00000005662	Uncharacterized protein.	Synaptotagmin IXb.	0.531
LOC111219363	vamp3	ENSSDUP00000001074	ENSSDUP00000001421	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.845
LOC111219749	LOC111217580	ENSSDUP00000032473	ENSSDUP00000001735	Synaptotagmin Vb.	Intersectin 2b.	0.538
LOC111219749	LOC111221499	ENSSDUP00000032473	ENSSDUP00000010556	Synaptotagmin Vb.	C2 domain-containing protein.	0.705
LOC111219749	LOC111233692	ENSSDUP00000032473	ENSSDUP00000027915	Synaptotagmin Vb.	Synaptotagmin XIb.	0.705