STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237265Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.927
st6gal2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.918
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
   
 0.917
B3GNT3
Hexosyltransferase.
   
 
 0.917
LOC111230274
Uncharacterized protein.
     
 0.914
b3gnt5
Hexosyltransferase.
   
 
 0.913
LOC111229061
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family.
     
 0.913
LOC111231853
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a; Belongs to the glycosyltransferase 29 family.
     
 0.913
LOC111231897
Hexosyltransferase.
   
 
 0.913
LOC111222736
Hexosyltransferase.
   
 
 0.912
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.