Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASK | CASK-2 | ENSSDUP00000016595 | ENSSDUP00000018273 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.759 |
CASK | ENSSDUP00000005747 | ENSSDUP00000016595 | ENSSDUP00000005747 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Thyroglobulin type-1 domain-containing protein. | 0.440 |
CASK-2 | CASK | ENSSDUP00000018273 | ENSSDUP00000016595 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.759 |
CASK-2 | ENSSDUP00000005747 | ENSSDUP00000018273 | ENSSDUP00000005747 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Thyroglobulin type-1 domain-containing protein. | 0.440 |
ENSSDUP00000005747 | CASK | ENSSDUP00000005747 | ENSSDUP00000016595 | Thyroglobulin type-1 domain-containing protein. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.440 |
ENSSDUP00000005747 | CASK-2 | ENSSDUP00000005747 | ENSSDUP00000018273 | Thyroglobulin type-1 domain-containing protein. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.440 |
ENSSDUP00000005747 | emg1 | ENSSDUP00000005747 | ENSSDUP00000015547 | Thyroglobulin type-1 domain-containing protein. | EMG1 N1-specific pseudouridine methyltransferase. | 0.434 |
ENSSDUP00000005747 | fcf1 | ENSSDUP00000005747 | ENSSDUP00000005415 | Thyroglobulin type-1 domain-containing protein. | FCF1 rRNA-processing protein. | 0.432 |
ENSSDUP00000005747 | rps6 | ENSSDUP00000005747 | ENSSDUP00000002679 | Thyroglobulin type-1 domain-containing protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.435 |
ENSSDUP00000005747 | rps7 | ENSSDUP00000005747 | ENSSDUP00000011196 | Thyroglobulin type-1 domain-containing protein. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.437 |
ENSSDUP00000005747 | utp11 | ENSSDUP00000005747 | ENSSDUP00000014409 | Thyroglobulin type-1 domain-containing protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.432 |
ENSSDUP00000005747 | utp3 | ENSSDUP00000005747 | ENSSDUP00000020391 | Thyroglobulin type-1 domain-containing protein. | UTP3 small subunit processome component. | 0.421 |
ENSSDUP00000005747 | wdr43 | ENSSDUP00000005747 | ENSSDUP00000025565 | Thyroglobulin type-1 domain-containing protein. | WD repeat domain 43. | 0.419 |
ENSSDUP00000005747 | wdr46 | ENSSDUP00000005747 | ENSSDUP00000017973 | Thyroglobulin type-1 domain-containing protein. | WD repeat domain 46. | 0.425 |
emg1 | ENSSDUP00000005747 | ENSSDUP00000015547 | ENSSDUP00000005747 | EMG1 N1-specific pseudouridine methyltransferase. | Thyroglobulin type-1 domain-containing protein. | 0.434 |
emg1 | fcf1 | ENSSDUP00000015547 | ENSSDUP00000005415 | EMG1 N1-specific pseudouridine methyltransferase. | FCF1 rRNA-processing protein. | 0.998 |
emg1 | rps6 | ENSSDUP00000015547 | ENSSDUP00000002679 | EMG1 N1-specific pseudouridine methyltransferase. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.992 |
emg1 | rps7 | ENSSDUP00000015547 | ENSSDUP00000011196 | EMG1 N1-specific pseudouridine methyltransferase. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.993 |
emg1 | utp11 | ENSSDUP00000015547 | ENSSDUP00000014409 | EMG1 N1-specific pseudouridine methyltransferase. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.996 |
emg1 | utp3 | ENSSDUP00000015547 | ENSSDUP00000020391 | EMG1 N1-specific pseudouridine methyltransferase. | UTP3 small subunit processome component. | 0.995 |
page 1 of 4