Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSDUP00000005767PH domain-containing protein. (49 aa)    
Predicted Functional Partners:
osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
   
   0.705
LOC111227340
Nipsnap homolog 1 (C. elegans).
   
  0.550
NIPSNAP2
NIPSNAP domain-containing protein.
   
  0.550
nipsnap2
Nipsnap homolog 2.
   
  0.550
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 
 0.537
LOC111233565
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 
 0.537
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
    
 
 0.532
pgam5
PGAM family member 5, serine/threonine protein phosphatase, mitochondrial.
    
   0.528
wdr44
WD repeat domain 44.
    
 
 0.524
lars2
Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.518
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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