STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237712LIF receptor subunit alpha a. (885 aa)    
Predicted Functional Partners:
il6st
Uncharacterized protein.
    
0.680
ENSSDUP00000020167
Cardiotrophin-like cytokine factor 1.
     
 0.643
LOC111230103
Interleukin 11a.
  
   
 0.607
lepr
Leptin receptor.
  
   
 0.512
LOC111221553
Ataxin 7-like 2a.
  
 
 0.507
LOC111223846
Homeobox and leucine zipper encoding a.
  
 
  0.495
LOC111217580
Intersectin 2b.
    
 0.489
itsn2
Intersectin 2a.
    
 0.489
csf3r
Colony stimulating factor 3 receptor (granulocyte).
    
0.484
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.474
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.