STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231536Phosphodiesterase 6H, cGMP-specific, cone, gamma, paralog a. (75 aa)    
Predicted Functional Partners:
LOC111233425
Guanylate cyclase.
   
 
 0.709
LOC111236830
Guanylate cyclase.
   
 
 0.687
LOC111234372
Guanylate cyclase.
   
 
 0.687
guk1
Guanylate kinase 1a.
   
 
  0.678
npr1
Guanylate cyclase.
   
 
 0.654
npr2
Guanylate cyclase.
   
 
 0.654
LOC111234078
Guanylate cyclase.
   
 
 0.654
LOC111227562
Adenylate cyclase type 1; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
     
  0.650
LOC111233203
5'-nucleotidase, cytosolic IAa.
     
  0.650
LOC111229434
Calcium activated nucleotidase 1b.
     
  0.650
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.