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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235565CD59 molecule (CD59 blood group). (124 aa)    
Predicted Functional Partners:
c9
Complement component 9.
   
 0.694
cd55
Uncharacterized protein.
     
 0.631
stx5
Syntaxin 5A; Belongs to the syntaxin family.
     
 0.601
c6
Complement component 6.
   
 
 0.561
LOC111234927
Uncharacterized protein.
     
 0.548
sec24a
SEC24 homolog A, COPII coat complex component.
     
 0.515
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
     
 0.512
sec24d
SEC24 homolog D, COPII coat complex component.
     
 0.496
sec24c
SEC24 homolog C, COPII coat complex component.
     
 0.496
LOC111227353
Uncharacterized protein.
     
 0.496
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.