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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chaf1bChromatin assembly factor 1, subunit B. (617 aa)    
Predicted Functional Partners:
chaf1a
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.966
LOC111229314
Anti-silencing function 1B histone chaperone.
   
 
 0.940
LOC111227112
Anti-silencing function 1Ba histone chaperone.
   
 
 0.940
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.928
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 
 0.861
LOC111225540
WD_REPEATS_REGION domain-containing protein.
   
 
 0.861
LOC111218630
WD_REPEATS_REGION domain-containing protein.
   
 
 0.861
insig2
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family.
    
 
 0.855
insig1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis.
    
 
 0.855
wdr73
WD repeat domain 73.
   
 
 0.851
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.