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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111238290Non-specific serine/threonine protein kinase. (690 aa)    
Predicted Functional Partners:
LOC111236845
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.959
LOC111230214
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.959
LOC111238487
TSC complex subunit 1b.
    
 0.916
ENSSDUP00000016177
Uncharacterized protein.
    
 0.916
LOC111227574
TBC1 domain family, member 7.
     
 0.913
LOC111216707
Activating transcription factor 4a.
     
 0.906
LOC111230364
Activating transcription factor 4b.
     
 0.904
bub1
BUB1 N-terminal domain-containing protein.
     
  0.900
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
     
 
0.900
stx18
Syntaxin 18.
   
 0.778
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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