STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
faap100Si:dkey-57h18.1. (854 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
 0.999
fancm
Uncharacterized protein.
   
 0.999
ENSSDUP00000023101
FA complementation group M.
   
 0.997
fancb
FA complementation group B.
    
 0.992
FANCA
FA complementation group A.
    
 0.992
faap24
FA core complex associated protein 24.
    
 0.992
fancc
FA complementation group C.
    
 0.991
fancd2
FA complementation group D2.
    
 0.986
cenpx
Centromere protein X.
    
 0.981
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.978
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.