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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan33Tetraspanin. (283 aa)    
Predicted Functional Partners:
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.522
LOC111228990
Zgc:85843.
      
 0.522
ptgfrn
Uncharacterized protein.
    
 
 0.489
pdzd11
PDZ domain containing 11.
    
 0.440
adam10
Uncharacterized protein.
    
 0.419
LOC111229691
ADAM metallopeptidase domain 10b.
    
 0.419
tmem182
Transmembrane protein 182a.
      
 0.416
LOC111232664
Transmembrane protein 182b.
      
 0.416
ENSSDUP00000017253
Tetraspanin 10; Belongs to the tetraspanin (TM4SF) family.
      
0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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