Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111226315 | LOC111227195 | ENSSDUP00000031358 | ENSSDUP00000017817 | Uncharacterized protein; Belongs to the AAA ATPase family. | Charged multivesicular body protein 6a. | 0.903 |
LOC111226315 | MLKL | ENSSDUP00000031358 | ENSSDUP00000022773 | Uncharacterized protein; Belongs to the AAA ATPase family. | Mixed lineage kinase domain like pseudokinase. | 0.904 |
LOC111226315 | VPS4B | ENSSDUP00000031358 | ENSSDUP00000010823 | Uncharacterized protein; Belongs to the AAA ATPase family. | Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. | 0.900 |
LOC111226315 | chmp3 | ENSSDUP00000031358 | ENSSDUP00000001498 | Uncharacterized protein; Belongs to the AAA ATPase family. | Charged multivesicular body protein 3. | 0.882 |
LOC111226315 | chmp6 | ENSSDUP00000031358 | ENSSDUP00000006002 | Uncharacterized protein; Belongs to the AAA ATPase family. | Charged multivesicular body protein 6. | 0.903 |
LOC111226315 | vps25 | ENSSDUP00000031358 | ENSSDUP00000017139 | Uncharacterized protein; Belongs to the AAA ATPase family. | Vacuolar protein sorting 25 homolog. | 0.480 |
LOC111226315 | vps28 | ENSSDUP00000031358 | ENSSDUP00000014677 | Uncharacterized protein; Belongs to the AAA ATPase family. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.558 |
LOC111226315 | vps36 | ENSSDUP00000031358 | ENSSDUP00000003813 | Uncharacterized protein; Belongs to the AAA ATPase family. | Vacuolar protein sorting 36 homolog. | 0.483 |
LOC111226315 | vps4a | ENSSDUP00000031358 | ENSSDUP00000005068 | Uncharacterized protein; Belongs to the AAA ATPase family. | Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. | 0.937 |
LOC111227195 | LOC111226315 | ENSSDUP00000017817 | ENSSDUP00000031358 | Charged multivesicular body protein 6a. | Uncharacterized protein; Belongs to the AAA ATPase family. | 0.903 |
LOC111227195 | MLKL | ENSSDUP00000017817 | ENSSDUP00000022773 | Charged multivesicular body protein 6a. | Mixed lineage kinase domain like pseudokinase. | 0.902 |
LOC111227195 | VPS4B | ENSSDUP00000017817 | ENSSDUP00000010823 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. | 0.903 |
LOC111227195 | chmp3 | ENSSDUP00000017817 | ENSSDUP00000001498 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 3. | 0.918 |
LOC111227195 | chmp6 | ENSSDUP00000017817 | ENSSDUP00000006002 | Charged multivesicular body protein 6a. | Charged multivesicular body protein 6. | 0.901 |
LOC111227195 | snf8 | ENSSDUP00000017817 | ENSSDUP00000012594 | Charged multivesicular body protein 6a. | Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. | 0.970 |
LOC111227195 | vps25 | ENSSDUP00000017817 | ENSSDUP00000017139 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 25 homolog. | 0.974 |
LOC111227195 | vps28 | ENSSDUP00000017817 | ENSSDUP00000014677 | Charged multivesicular body protein 6a. | Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.895 |
LOC111227195 | vps36 | ENSSDUP00000017817 | ENSSDUP00000003813 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 36 homolog. | 0.959 |
LOC111227195 | vps4a | ENSSDUP00000017817 | ENSSDUP00000005068 | Charged multivesicular body protein 6a. | Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. | 0.905 |
MLKL | LOC111226315 | ENSSDUP00000022773 | ENSSDUP00000031358 | Mixed lineage kinase domain like pseudokinase. | Uncharacterized protein; Belongs to the AAA ATPase family. | 0.904 |
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