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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE1Zinc finger FYVE-type containing 1. (786 aa)    
Predicted Functional Partners:
LOC111217580
Intersectin 2b.
    
 0.947
itsn2
Intersectin 2a.
    
 0.947
LOC111232820
Si:ch211-11n16.2.
  
  
 
0.902
rps27a
Ribosomal protein S27a.
    
  0.828
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.823
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.823
LOC111228722
UEV and lactate/malate dehyrogenase domains.
    
 0.796
ENSSDUP00000026339
UEV domain-containing protein.
    
 0.758
tsg101
Tumor susceptibility 101a.
    
 0.758
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.709
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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