STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem68Transmembrane protein 68. (333 aa)    
Predicted Functional Partners:
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.590
LOC111229984
Potassium inwardly-rectifying channel, subfamily J, member 14.
      
 0.562
LOC111222902
RNA pseudouridine synthase D4.
     
 0.552
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.538
slc16a4
Solute carrier family 16 member 4.
      
 0.535
LOC111219851
Proteasome 26S subunit, non-ATPase 11b.
 
    
 0.514
xkr9
XK-related protein.
      
 0.513
PSMD11
PCI domain-containing protein.
 
    
 0.512
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.499
sap130
Sin3A-associated protein a.
     
 0.486
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.