Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unc93aUnc-93 homolog A. (465 aa)    
Predicted Functional Partners:
brca1
Uncharacterized protein.
   
 
 0.947
LOC111234920
Uncharacterized protein.
      
 0.768
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.747
svopl
SVOP-like.
      
 0.722
slc35e4
Solute carrier family 35 member E4.
    
 
 0.698
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.685
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.669
sord
Sorbitol dehydrogenase.
      
 0.665
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.630
mfsd5
Major facilitator superfamily domain containing 5.
   
  
 0.624
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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