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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc93aUnc-93 homolog A. (465 aa)    
Predicted Functional Partners:
brca1
Uncharacterized protein.
   
 
 0.702
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.595
LOC111234920
Uncharacterized protein.
      
 0.594
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.587
svopl
SVOP-like.
      
 0.585
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.561
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.538
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
     
 0.527
LOC111218812
Toll-like receptor 7; Belongs to the Toll-like receptor family.
    
 0.515
TLR8
Toll like receptor 8; Belongs to the Toll-like receptor family.
    
 0.515
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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