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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bpnt1Bisphosphate nucleotidase 1. (309 aa)    
Predicted Functional Partners:
papss1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
  
 
 0.975
LOC111235358
3'-phosphoadenosine 5'-phosphosulfate synthase 2a.
  
 
 0.975
impad1
Inositol monophosphatase domain containing 1.
     
0.913
ISYNA1
Inositol-3-phosphate synthase 1.
     
 0.857
flad1
Flavin adenine dinucleotide synthetase 1.
  
 
 0.673
c1qbp
Complement component 1, q subcomponent binding protein.
      
 0.601
suox
Sulfite oxidase.
      
 0.594
clp1
Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]
      
 0.590
tmem208
Transmembrane protein 208.
      
 0.580
eprs1
Glutamyl-prolyl-tRNA synthetase.
      
 0.567
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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