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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237023Discs, large (Drosophila) homolog-associated protein 2b. (980 aa)    
Predicted Functional Partners:
LOC111219640
Uncharacterized protein.
   
 0.753
ENSSDUP00000020522
SH3 and multiple ankyrin repeat domains 3a.
   
 0.753
shank1
SH3 and multiple ankyrin repeat domains 1.
   
 0.753
Shank2
Uncharacterized protein.
    
 0.735
ENSSDUP00000020145
PDZ domain-containing protein.
    
 0.676
ENSSDUP00000020182
PDZ domain-containing protein.
    
 0.633
dlg4
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
    
 0.578
LOC111237413
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.578
LOC111231758
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.578
dlg3
Discs, large homolog 3 (Drosophila).
    
 0.578
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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