STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111233896DnaJ heat shock protein family (Hsp40) member B6a. (251 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
 
 0.847
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.806
hspa4
Heat shock protein 4b.
 
 0.797
LOC111234347
Heat shock protein 4a.
 
 0.797
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
 
 0.791
hspa4l
Heat shock protein 4 like.
 
 0.783
hspa13
Heat shock protein 70 family, member 13.
 
 0.763
ENSSDUP00000011941
Si:ch211-199o1.2.
 
 0.759
LOC111238863
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.751
LOC111234021
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.748
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.