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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTFP1Mitochondrial fission process 1. (178 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
  0.793
dap3
Death associated protein 3.
      
 0.518
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.511
snx15
Sorting nexin 15.
      
 0.465
rps27a
Ribosomal protein S27a.
    
  0.452
ENSSDUP00000029515
Uncharacterized protein.
      
 0.437
gak
Cyclin G associated kinase.
     
 0.428
LOC111237171
Zgc:109986.
     
 0.427
TOMM20
Translocase of outer mitochondrial membrane 20.
     
 0.427
LOC111232948
Translocase of outer mitochondrial membrane 20b.
     
 0.427
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.